Welcome to Gront lab laboratory protocols¶
This repository provides notes, protocols and tutorials related to multiscale modeling of biomacromolecules, primarily proteins and their complexes, that are used in daily research tasks by Gront lab (http://bioshell.pl). While documentation related to BioShell package (bioinformatics and biosimulation tools) can be found on separate site: http://bioshell.readthedocs.io/, this pages document mainly Rosetta, blast and other tools commonly used in the field.
- Preliminary information and input/output file processing
- How to pick fragments for modeling with Rosetta
- ab-initio and ab-relax protocols
- Score patching